Data from:
Eva-Maria Schoetz (Eva-Maria Schötz)
Princeton University
Movie file from:
http://www.genomics.princeton.edu/schoetzlab/HGD_sorting_leftyR_cycG_txt.mov
Local copy of movie at:
http://cbo.biocomplexity.indiana.edu/svn/model_repo_v0/Schoetz_cell_sorting/HGD_sorting_leftyR_cycG_txt.mov
| Ectoderm (lefty-1 overexpressing) cells (red) and mesendoderm (blend of mesoderm and endoderm, cyclops overexpressing) cells (green) in a hanging drop setup. Olympus DSU, 10x magnification. 4 frames/sec. Total duration approx. 16h |
## ## HERBS AND JIMS BIG DATA AND COMPUTATIONAL MODEL REPOSITORY ## Indiana University Bloomington ## University of Washington ## ## Species: ## PIR:7955 Zebrafish Danio rerio ## MeSH:B01.050.150.900.493.200.244.828 Zebrafish ## Ectoderm: ## CL:0000221 ectodermal cell ectoderm cell ## FMA:72549 Ectodermal cell Ectoderm cell ## MESH:A.16.254.425.273 (deprecated) ## MeSH:A16.504.273 ## Endoderm: ## MeSH:A16.504.407 ## Mesoderm: ## MeSH:A16.504.660 ## Mesendoderm: ## XAO:0003044 endomesoderm mesendoderm ## ZFA:0000117 hypoblast mesendoderm ## Lefty-1: ## PRO:000000287 ## Cyclops:human NDR2 appears to be a different gene ## PIR:P87358 Cyclops Znr-1 ndr2 (zebrafish) ## Processes and Interactions: ## Motility: ## MeSH:G04.299.283 Cell Movement Motility, Cell cell motility ## MeSH:G07.700.560.500.180 ## GO:0048870 cell motility ## Cell Sorting: ## ## Cell-cell Adhesion: ## GO:0016337 ## MeSH:G04.299.117 Cell Adhesion ## Embryogenesis: ## MeSH:G07.700.320.500.325.180 Embryonic Development Embryogenesis ## MeSH:G08.686.785.760.170.104 Embryonic Development Embryogenesis ## GO:0009790 embryo development embryogenesis ## ##
Biocomplexity Institute
Indiana University
9 March 2011